Biologist & Bioinformatician
I am Francesco Cecere, a Biologist with a deep-rooted interest in Genomics and Bioinformatics.
With experience in both rare genetic syndromes (Beckwith-Wiedemann and Silver-Russell syndromes) and pediatric cancer (Wilms tumor), I have developed a strong foundation in translational research.
My work primarily focuses on the intricate world of gene regulatory networks, where I leverage advanced Bioinformatics techniques to analyze Genomics data.
This blend of biology and informatics is not just my profession but my passion.
This passion drives my dedication to scientific innovation, particularly in Bioinformatics, and my commitment to applying this expertise for the advancement of health and science.
Project: "Progetto PNC-E3-2022-23683269 Hub Life Science-Terapia Avanzata (HLS-TA)"
Title: Set-up delle pipeline di analisi omiche e multi-omiche per la caratterizzazione dei campioni a supporto degli studi clinici.
Codice univoco investimento: PNC-E.3 - CUP:H63C22000650001 - WBS: HPNR0004
Project: "National Centre for HPC, Big Data and Quantum Computing"
Title: Development and testing of algorithms for the reconstruction of gene regulatory networks from single-cell transcriptomic data.
European Union – Next Generation EU – CN00000013 - CUP: B93C22000620006
Integrated clinical, genetic, and epigenetic data for Wilms tumor stratification. Tools: EPIC methylation arrays, RNA-seq, Exome-seq.
D.R. n. 1018 del 21/11/2022 durata n. 36 mesi
Project: AIRC IG 2020 - ID 24405
Title: Causes and mechanisms of genomic imprinting disturbances in Beckwith-Wiedemann syndrome and Wilms Tumor
Analyzed BS-seq & scRNA-seq of germ cells with Dr. Kelsey & Andrews.
Thesis Title: Investigating the causes of DNA methylation disturbances in Imprinting Disorders.
Evaluation: Excellent
Title: Identificazione di nuovi fattori trascrizionali che legano le regioni di controllo dell'imprinting.
Final grade: 110/110 cum laude
Title: Effetti neuropatologici dell'abuso di alcol associati a carenza di Tiamina.
Final grade: 110/110 cum laude
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Università degli studi di Torino, Dip. di Biotecnologie e Scienze per la Salute
Babraham Institute
The Intensive School for Advanced Graduate Studies (ISAGS)
Università di Pavia
Instructors and Organizers: Dr. Luca Ambrosino and Dr. Francesco Cecere
Institute of Genetics and Biophysics "Adriano Buzzati-Traverso", Consiglio Nazionale delle Ricerche, Naples, Italy
BBCC Tutorial – scRNA-seq data analysis using R, from raw counts to cell clustering.
Instructors: Prof. Annamaria Carissimo (IAC/CNR), Dr. Dario Righelli (Univ. Padova), Dr. Valeria Policastro (Univ. Federico II Naples), Dr. Francesco Cecere (DiSTABiF, Univ. Campania "Luigi Vanvitelli")
Virtual Workshop
Prot. N. 162103 del 15/09/2025 – Repertorio DDMF N. 173/2025
4 hours
Two lectures, 5 hours total
4 hours
D.D n. 242/2022 prot. n. 81546 del 1/06/22 – CdL Biotecnologie
D.D n. 280 del 23/06/22 – CdL Scienze Ambientali
GIMP - A Comprehensive R package for exploring Genomic Imprinting Methylation Patterns in Imprinting Disorders
Genomic Imprinting Methylation Patterns
An R package for exploring genomic imprinting methylation patterns in imprinting disorders, providing comprehensive tools for analysis and visualization.
View on GitHubSingle-Cell Gene Regulatory Network Analysis
A comprehensive R package for inferring, evaluating, and visualizing gene regulatory networks (GRNs) from single-cell RNA sequencing data, with multiple inference algorithms, consensus construction, and rich visualizations.